I personally like the ECU tune, don't get me wrong the JB4 is a great plug & play tune. Most guy's run the JB4 with WMI & E30 + the bolt on mods to get close to 500whp but I didn't want to run those. John at Tork Motorsports does flash tunes with the ECU but that will void your warranty. I went to a local tuning shop here in Arizona where they adjusted the settings in the ECU, here's a Dyno sheet of my numbers. A lot of guy's will say an ECU tune is always better including myself but the JB4 is the easiest to remove.
The bottom number was with bolt on mods only, the middle number was with the JB4 & the top is with my ECU tune. That tune was with 91oct, I wanted a tune where I could drive across the USA an not have a problem. When I fill up with 100oct the power goes up to 490whp & 535wtq..